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Targeting Fusion Oncoproteins in Childhood Cancers (TFCC)

Generation of Fusion Proteins Through Chromosomal Rearrangement

Fusion proteins, which can occur when parts of different chromosomal regions are joined, may drive the development of many cancers in children.

Credit: Credit: Shannon McArdel, Ph.D. Harvard University SITN Blog, June 2017. CC BY-NC-SA 4.0.

The overall goal of the Targeting Fusion Oncoproteins in Childhood Cancers (TFCC) Network is to form a dynamic and collaborative team of investigators to advance our understanding of the mechanisms of action of fusion oncoproteins in pediatric cancers and apply novel chemical strategies to accelerate innovative drug discovery and preclinical development of therapeutics for fusion oncoprotein-driven childhood cancers. 

The TFCC network, funded by DCB and the NCI Division of Cancer Treatment and Diagnosis (DCTD), includes:

  • Researchers investigating the molecular mechanisms by which fusion oncoproteins drive childhood cancers.
  • Multidisciplinary research groups working at Next Generation Chemistry Centers that are focusing on innovative medicinal chemistry, chemical biology and chemoproteomic approaches to target fusion oncoprotein-driven cancers. 

This program aims to combine therapeutic approaches with continued mechanistic studies to reveal potential treatment targets and advance the development of therapeutic strategies for fusion oncoprotein-driven childhood cancers.

Potential Impact of Fusion Oncoprotein Research

Progress in our understanding of fusion oncoprotein-driven cancer biology through investigator-initiated research and the Fusion Oncoproteins in Childhood Cancers (FusOnC2) Consortium, along with recent technological developments, provides an opportunity for collaborative efforts towards the development of new treatment approaches for childhood cancers.  

Advances in chemical biology have expanded the universe of “druggable” protein targets in pediatric cancers and new technological approaches provide strategies for the direct targeting of fusion oncoproteins and the proteins with which they interact within complexes. Progress in medicinal chemistry (such as PROTACs and molecular glues) provides a knowledge base for the design of new therapies for fusion-driven childhood cancers. 

While directly targeting fusion oncoproteins would be ideal because of their exclusivity in tumors, other targets (e.g., interacting proteins, synthetic lethal partners, mediators of fusion oncoprotein function) may be more amenable to these strategies. 

The TFCC aims to build on the progress of fusion oncoprotein research and translate preclinical discoveries into the development of effective treatments for fusion oncoprotein-driven childhood cancers.

TFCC News

Program Directors in DCB and DCTD discuss challenges and future opportunities for the development of therapies targeting fusion oncoproteins in childhood cancers in a JNCI Perspective

TFCC has added Research Advocates and scientific investigators as Associate Members of the Network. The Research Advocates are Sharon Hammond (Summer’s Way Foundation) and Craig and Suzanne Vincze (Max Vincze Foundation). The four investigators are Kris Wood (Duke University), Jeffrey Klco (St. Jude), Asmin Tulpule (MSKCC), and Srinivas Viswanathan (Dana-Farber).
 

TFCC UM1 principal investigators Corrine Linardic (Duke University) and Angela Koehler (MIT) and colleagues published a review article summarizing the history, contemporary application, clinical evaluation, and future of fusion positive-rhabdomyosarcoma (RMS) systemic therapy.


TFCC UM1 principal investigator Daniel Nomura (UC Berkeley) described the discovery and optimization of a lead compound bearing a unique sulfinyl aziridine warhead that engages MYC as a pure MYC/MAX protein complex, destabilizing MYC in cancer cells and degrading MYC in a proteasome-dependent manner. The authors demonstrate that it is possible to interrogate certain intrinsically disordered regions within transcription factors such as MYC, with implications for targeting proteins previously considered to be “undruggable."


TFCC UM1 principal investigator Angela Koehler (MIT) published a comprehensive evaluation of degradation versus inhibition of the transcription factor CDK9 to assess when degradation might offer superior therapeutic outcomes. The findings suggest that CDK9 degradation offers a more robust strategy to overcome limitations associated with its inhibition.

Contacts for TFCC

For additional information about TFCC, please contact Dr. Keren Witkin in DCB or Dr. Joseph Agyin in DCTD

Funded Projects

Projects Investigating Mechanisms of Fusion-Driven Oncogenesis in Childhood Cancers (U01s)

InstitutionPrincipal Investigator(s)Center Title
Brigham and Women's HospitalChristopher French, Kyle EagenOvercoming limitations of BET inhibition in NUT carcinoma
Memorial Sloan Kettering Cancer CenterMarc Ladanyi, Andrea VenturaDesmoplastic small round cell tumor: Harnessing new insights and new models
St. Jude Children's Research HospitalStephen Mack, Richard KriwackiDiscovering the mechanisms underlying oncogenesis by ZFTA-RELA and pinpointing therapeutic targets

Next Generation Chemistry Centers for Fusion Oncoproteins (UM1)

InstitutionPrincipal Investigator(s)Center Title
Massachusetts Institute of TechnologyAngela Koehler, Alex Burgin, Alexandra Gould, Corinne Linardic, Daniel NomuraChemical approaches to modulate PAX3-FOXO1 in fusion-positive alveolar rhabdomyosarcoma
University of Texas Southwestern Medical CenterDavid McFadden, Joseph ReadyTargeting transcriptional addiction in fusion-driven sarcoma

Research Advocates

Associate Members

InstitutionAssociate Member
Dana-Farber Cancer Institute Srinivas Viswanathan
Duke University Kris Wood
Memoral Sloan Kettering Cancer CenterAsmin Tulpule
St. Jude Children's Research HospitalJeffrey Klco
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